Publications

Publications by year.

Journal articles

  1. Burgos-Madrigal, Andrea, Orihuela-Espina, Felipe and Reyes-Garc\'ia, Carlos Alberto (2021) Ordering of functions according to multiple fuzzy criteria: Application to denoising electroencephalography. Soft Computing, Accepted.(BibTeX)
  2. Jes\'us Joel Rivas, Luis Castrej\'on, Mar\'ia del Carmen Lara, Lorena Palafox, Jorge Hern\'andez-Franco, Felipe Orihuela-Espina, Amanda Williams, Nadia Bianchi-Berthouze and Luis Enrique Sucar (2021) Multi-label and Multimodal Classifier for Affective States Recognition in Virtual Rehabilitation. IEEE Transactions on Affective Computing.(BibTeX)
  3. Kuan-Cheng Wu, John Sunwoo, Faheem Sheriff, Parisa Farzam, Parya Y. Farzam, Felipe Orihuela-Espina, Sarah L. LaRose, Andrew D. Monk, Mohammad Ali Aziz-Sultan, Nirav Patel, Henrikas Vaitkevicius and Maria Angela Franceschini (2021) Validation of diffuse correlation spectroscopy measures of critical closing pressure against transcranial Doppler ultrasound in stroke patients. Journal of Biomedical Optics, Accepted.(BibTeX)
  4. Rivas, Jes\'us Joel, Orihuela-Espina, Felipe, Palafox, Lorena, Bianchi-Berthouze, Nadia, Lara, Mar\'ia del Carmen, Hern\'andez-Franco, Jorge and Sucar, Luis Enrique (2020) Unobtrusive Inference of Affective States in Virtual Rehabilitation from Upper Limb Motions: A Feasibility Study. IEEE Transactions on Affective Computing, 11(3):470-481.(BibTeX)
  5. Borrego, Gilberto, Mor\'an y Solares, Alberto L., Meza-Kubo, Victoria, Orihuela-Espina, Felipe and Sucar, Luis E. (2020) Key factors that influence the UX of a dual-player game for the cognitive stimulation and motor rehabilitation of older adults. Universal Access in the Information Society, e-pub ahead of print.(BibTeX)
  6. Casillas-Figueroa, Ra\'ul, Mor\'an, Alberto L., Meza-Kubo, Victoria, Ram\'irez-Fernández, Cristina, Acosta-Quiroz, Christian, Orihuela-Espina, Felipe and Montero-Hernandez, Samuel (2020) ReminiScentia: shaping olfactory interaction in a personal space for multisensory stimulation therapy. Personal and Ubiquitous Computing, E-pub.(BibTeX)
  7. Chetanya Sharma, Harsmirat Singh, Felipe Orihuela-Espina, Ara Darzi and Mikael Hans Sodergren (2020) Visual gaze patterns reveal surgeons' ability to identify risk of bile duct injury during laparoscopic cholecystectomy. HPB.(BibTeX)
  8. Shender-Mar\'ia \'Avila-Sansores, Gustavo Rodr\'iguez-G\'omez, Ilias Tachtsidis and Felipe Orihuela-Espina (2020) Interpolated functional manifold for functional near infrared spectroscopy analysis at group level.. Neurophotonics.(BibTeX)
  9. Hernandez-Contreras, Daniel, Peregrina-Barreto, Hayde, Rangel-Magdaleno, Jose J. and Orihuela-Espina, Felipe (2019) Statistical Approximation of Plantar Temperature Distribution on Diabetic Subjects based on Beta Mixture Model. IEEE Access, Accepted.(BibTeX)
  10. Modi, Hemel N., Singh, Harsimrat, Fiorentino, Francesca, Orihuela-Espina, Felipe, Athanasiou, Thanos, Yang, Guang-Zhong, Darzi, Ara W. and Leff, Daniel R. (2019) Association of Residents' Neural Signatures With Stress Resilience During Surgery. JAMA Surgery, 7:e192552.(BibTeX)
  11. Gonz\'alez'Soto, Mauricio and Orihuela-Espina, Felipe (2019) Reinforcement Learning is not a Causal problem. arXiv, 1908.07617v1.(BibTeX)
  12. Montero-Hernandez, Samuel, Orihuela-Espina, Felipe, Sucar, Luis Enrique, Pinti, Paola, Hamilton, Antonia, Burgess, Paul and Tachtsidis, Ilias (2018) Estimating Functional Connectivity Symmetry between Oxy- and Deoxy- Haemoglobin: Implications for fNIRS Connectivity Analysis. Algorithms. Special Issue "Algorithms for Functional Near-Infrared Spectroscopy, Cerebral Oximetry and Near-Infrared Imaging", 11(5):70 (16 pp).(BibTeX)
  13. Orihuela-Espina, Felipe, Leff, Daniel R., James, David R. C., Yang, Guang-Zhong and Darzi, Ara W. (2018) Imperial College Near Infrared Spectroscopy Neuroimaging Analysis (ICNNA) Framework. Neurophotonics, 5(1):011011.(BibTeX)
  14. Herrera-Vega, Javier, Orihuela-Espina, Felipe, Ibarg\"uengoytia, Pablo H., Garc\'ia, Uriel A., Vila Rosado, Dan-El, Morales, Eduardo F. and Sucar, Luis Enrique (2018) A local multiscale probabilistic graphical model for data validation and reconstruction, and its application in industry. Engineering Applications of Artificial Intelligence, Accepted.(BibTeX)
  15. Soto-P\'erez de Celis, Enrique, Baez-Bagattela, Jos\'e Abraham, Lira-Huerta, Ernesto, Herrera de la Luz, Alejandro, Parra-Cabrera, Socorro, Orihuela-Espina, Felipe and P\'erez de Celis-Herrero, Mar\'ia de la Concepci\'on (2018) Sistema m\'ovil basado en sensores para la promoci\'on y la monitorizaci\'on en tiempo real de la actividad f\'isica. Salud P\'ublica de M\'exico, 60(2):119-120.(BibTeX)
  16. Lami, Mariam, Singh, Harsimrat, Dilley, James H., Ashraf, Hajra, Edmondon, Matthew, Orihuela-Espina, Felipe, Hoare, Jonathan, Darzi, Ara and Sodergren, Mikael H. (2018) Gaze patterns hold key to unlocking successful search strategies and increasing polyp detection rate in colonoscopy. Endoscopy, E-pub ahead of print.(BibTeX)
  17. Leff, Daniel R., Yongue, Gabriella, Vlaev, Ivo, Orihuela-Espina, Felipe, James, David, Taylor, Michael, Athanasiou, Thanos, Dolan, Roy, Yang, Guang-Zhong and Darzi, Ara W. (2017) Contemplating The Next Manoeuvre: Functional Neuroimaging Reveals Intraoperative Decision-making Strategies. Annals of Surgery, 265(2):320-330.(BibTeX)
  18. Modi, Hemel N., Singh, Harsimrat, Orihuela-Espina, Felipe, Athanasiou, Thanos, Yang, Guang-Zhong, Darzi, Ara W. and Leff, Daniel R. (2017) Temporal Stress in the Operating Room: Brain Engagement Promotes Coping, Disengagement Prompts Choking. Annals of Surgery, E-pub ahead of print.(BibTeX)
  19. Herrera-Vega, Javier, Trevi\~no-Palacios, Carlos G. and Orihuela-Espina, Felipe (2017) Neuroimaging with Functional Near Infrared Spectroscopy: from formation to interpretation. Infrared Physics \& Technology, 85:225-237.(BibTeX)
  20. Orihuela-Espina, Felipe, S\'anchez-Villavicencio, Israel, Femat Rold\'an, Giovana, Palafox, Lorena, Leder, Ronald, Sucar, Luis Enrique and Hern\'andez-Franco, Jorge (2016) Response to "Letter to the editor: Robot training for hand motor recovery in subacute stroke patients; a randomised controlled trial". Journal of Hand Therapy, Accepted.(BibTeX)
  21. Shetty, Kunal, Leff, Daniel Richard, Orihuela-Espina, Felipe, Yang, Guang-Zhong and Darzi, Ara W. (2016) Persistent Prefrontal Engagement Despite Improvements in Laparoscopic Technical Skill. JAMA Surgery, 151(7):682-684.(BibTeX)
  22. Orihuela-Espina, Felipe, S\'anchez-Villavicencio, Israel, Femat Rold\'an, Giovana, Palafox, Lorena, Leder, Ronald, Sucar, Luis Enrique and Hern\'andez-Franco, Jorge (2016) Robot training for hand motor recovery in subacute stroke patients; a randomised controlled trial. Journal of Hand Therapy, 29(1):51-57.(BibTeX)
  23. Leff, Daniel R., James, David, Orihuela-Espina, Felipe, Kwok, Ka-Wai, Sun, Loi-Wah, Mylonas, George P., Athanasiou, Thanos, Darzi, Ara W. and Yang, Guang-Zhong (2015) The impact of expert visual guidance on trainee visual search strategy, visual attention and motor skills. Frontiers in Human Neuroscience, 9:256.(BibTeX)
  24. Mor\'an, Alberto Leopoldo, Orihuela-Espina, Felipe, Meza-Kubo, Victoria, Grimaldo-Mart\'inez, Ana I., Ram\'irez-Fern\'andez, Cristina, Garc\'ia-Canseco, Elo\'isa, Oropeza-Salas, Juan Manuel and Sucar, Luis E. (2015) Out of context serious games: Transversal reutilization of games across healthcare domains. International Journal of Computer Systems Science and Engineering. Special issue: New Holistic Trends in Ambiet Intelligence, 30(1):43-55.(BibTeX)
  25. Mor\'an, Alberto L., Ram\'irez-Fern\'andez, Cristina, Meza-Kubo, Victoria, Orihuela-Espina, Felipe, Garc\'ia-Canseco, Elo\'isa, Grimaldo-Mart\'inez, Ana I. and Sucar, Luis E. (2015) On the effect of previous technological experience on the usability of a virtual rehabilitation tool for the physical activation and cognitive stimulation of elders. Journal of Medical Systems, 39(9):104.(BibTeX)
  26. Paggetti, Giulia, Leff, Daniel R., Orihuela-Espina, Felipe, Mylonas, George P., Darzi, Ara W., Yang, Guang-Zhong and Menegaz, Gloria (2015) The Role of the Posterior Parietal Cortex in Stereopsis and Hand-eye Coordination during Motor Task Behaviours. Cognitive Processing, In press.(BibTeX)
  27. Sucar, Luis Enrique, Orihuela-Espina, Felipe, Vel\'azquez, Roger Luis, Reinkensmeyer, David J., Leder, Ronald and Hern\'andez-Franco, Jorge (2014) Gesture Therapy: An upper limb virtual reality-based motor rehabilitation platform. IEEE Transactions on Neural Systems and Rehabilitation Engineering, 22(3):634-643.(BibTeX)
  28. James, David R. C., Leff, Daniel R., Orihuela-Espina, Felipe, Kwok, Ka-Wai, Mylonas, George P., Athanasiou, Thanos, Darzi, Ara W. and Yang, Guang-Zhong (2013) Enhanced Frontoparietal Network Architectures Following 'Gaze-Contingent' Versus 'Free-Hand' Motor Learning. NeuroImage, 64:267-276.(BibTeX)
  29. Hern\'andez-Leal, Pablo, R\'ios-Flores, Alma, \'Avila-R\'ios, Santiago, Reyes-Ter\'an, Gustavo, Gonz\'alez, Jes\'us A., Fiedler-Cameras, Lyndsey, Orihuela-Espina, Felipe, Morales, Eduardo F. and Sucar, Luis Enrique (2013) Discovering HIV mutational pathways using Temporal Bayesian Networks. Artificial Intelligence in Medicine, 57(3):185-195.(BibTeX)
  30. Orihuela-Espina, Felipe, Fern\'andez del Castillo, Isabel, Palafox, Lorena, Pasaye, Erick, S\'anchez-Villavicencio, Israel, Leder, Ronald, Hern\'andez-Franco, Jorge and Sucar, Luis Enrique (2013) Neural reorganization accompanying upper limb motor rehabilitation from stroke with virtual reality-based Gesture Therapy. Topics in Stroke Rehabilitation, 20(3):197-209.(BibTeX)
  31. Clark, James, Orihuela-Espina, Felipe, Sodergren, Mikael H., James, David R. C., Karimyan, Vahe, Teare, Julian, Darzi, Ara W. and Yang, Guang-Zhong (2013) A quantitative scale to define endoscopic torque control during Natural Orifice Surgery. Minimally Invasive Therapy \& Allied Technologies, 22(1):17-25.(BibTeX)
  32. Karimyan, Vahe, Orihuela-Espina, Felipe, Leff, Daniel R., Clark, James, Sodergren, Mikael H., Darzi, Ara W. and Yang, Guang-Zhong (2012) Spatial awareness in Natural Orifice Transluminal Endoscopic Surgery (NOTES) navigation. International Journal of Surgery, 10(2):80-86.(BibTeX)
  33. Kwok, Ka-Wai, Sun, Loi-Wah, Mylonas, George P., James, David R. C., Orihuela-Espina, Felipe and Yang, Guang-Zhong (2012) Collaborative Gaze Channelling for Improved Cooperation during Robotic Assisted Surgery. Annals of Biomedical Engineering, 40(10):2156-2167.(BibTeX)
  34. Leff, Daniel R., Orihuela-Espina, Felipe, Elwell, Clare E., Athanasiou, Thanos, Delpy, David, Darzi, Ara W. and Yang, Guang-Zhong (2011) Assessment of the Cerebral Cortex during Motor Task Behaviours in Adults: A Systematic Review of Functional Near Infrared Spectroscopy (fNIRS) Studies. NeuroImage, 54(4):2922-2936.(BibTeX)
  35. James, David R. C., Orihuela-Espina, Felipe, Leff, Daniel R., Sodergren, Mikael H., Athanasiou, Thanos, Darzi, Ara W. and Yang, Guang-Zhong (2011) The Ergonomics of Natural Orifice Translumenal Endoscopic Surgery (NOTES) Navigation in terms of Performance, Stress and Cognitive Behaviour. Surgery, 149(4):525-533.(BibTeX)
  36. Sodergren, Mikael H., Orihuela-Espina, Felipe, Froghi, Farid, Clark, James, Teare, Julian, Yang, Guang-Zhong and Darzi, Ara W. (2011) Value of orientation training in laparoscopic cholecystectomy. British Journal of Surgery, 98(10):1437-1445.(BibTeX)
  37. Calcagni, Antonio, Gibson, Jonathan M., Styles, Iain B., Claridge, Ela and Orihuela-Espina, Felipe (2011) Multispectral retinal image analysis: a novel non-invasive tool for retinal imaging. Eye, 25(12):1562-1569.(BibTeX)
  38. Sodergren, Mikael H., Orihuela-Espina, Felipe, Mountney, Peter, Clark, James, Teare, Julian, Darzi, Ara W. and Yang, Guang-Zhong (2011) Orientation strategies in Natural Orifice Translumenal Endoscopic Surgery. Annals of Surgery, 254(2):257-266.(BibTeX)
  39. Clark, James, Gillen, S., James, David R. C., Fiolka, A., Karimyan, Vahe, Sodergren, Mikael H., Orihuela-Espina, Felipe, Friess, H., Darzi, Ara W., Feussner, H. D. and Yang, Guang-Zhong (2011) Transgastric or Trans-Sigmoidal? The Impact of the Choice of Access on Task Performance in Target Natural Orifice Translumenal Endoscopic Surgery Procedures. Journal of Laparoendoscopic \& Advanced Surgical Techniques A., 21(3):237-242.(BibTeX)
  40. Sodergren, Mikael H., Orihuela-Espina, Felipe, Clark, James, Teare, Julian, Yang, Guang-Zhong and Darzi, Ara W. (2010) Evaluation of orientation strategies in laparoscopic cholecystectomy. Annals of Surgery, 252(6):1027-1036.(BibTeX)
  41. Mylonas, George P., Kwok, Ka-Wai, James, David R. C., Leff, Daniel R., Orihuela-Espina, Felipe, Darzi, Ara W. and Yang, Guang-Zhong (2010) Gaze-Contingent Motor Channelling, Haptic Constraints and associated Cognitive Demand for Robotic MIS. Medical Image Analysis, 16(3):612-631.(BibTeX)
  42. Orihuela-Espina, Felipe, Leff, Daniel R., James, David R. C., Darzi, Ara W. and Yang, Guang-Zhong (2010) Quality control and assurance in functional near infrared spectroscopy (fNIRS) experimentation. Physics in Medicine and Biology, 55(13):3701-3724.(BibTeX)
  43. Leff, Daniel R., Orihuela-Espina, Felipe, Athanasiou, Thanos, Karimyan, Vahe, Elwell, Clare E., Yang, Guang-Zhong and Darzi, Ara W. (2010) 'Circadian Cortical Compensation': A Longitudinal Study of Brain Function during Technical and Cognitive Skills in Acutely Sleep Deprived Surgical Residents. Annals of Surgery, 252(6):1082-1090.(BibTeX)
  44. Sodergren, Mikael H., Orihuela-Espina, Felipe, Clark, James, Darzi, Ara W. and Yang, Guang-Zhong (2009) A hidden markov model-based analysis framework using eye-tracking data to characterise re-orientation strategies in minimally invasive surgery. Cognitive Processing, 11(3):275-283.(BibTeX)
  45. Leff, Daniel R., James, David R. C., Orihuela-Espina, Felipe, Darzi, Ara W. and Yang, Guang-Zhong (2009) The frontal cortex is activated during learning of endoscopic procedures (Ohuchida et al., Surgical Endoscopy, January 2009). Surgical Endoscopy, 24(4):968-969.(BibTeX)
  46. Sodergren, Mikael H., Orihuela-Espina, Felipe, Clark, James, Darzi, Ara W. and Yang, Guang-Zhong (2009) A model to characterise re-orientation strategies in natural orifice translumenal endoscopic surgery. Cognitive Processing, 10(Suppl. 2):S307-S311.(BibTeX)
  47. Leff, Daniel R., Elwell, Claire, Orihuela-Espina, Felipe, Atallah, Louis, Delpy, David, Darzi, Ara W. and Yang, Guang-Zhong (2008) Changes in prefrontal cortical behaviour depend upon familiarity on a bimanual co-ordination task: An fNIRS study. NeuroImage, 39(2):805-813.(BibTeX)
  48. Leff, Daniel R., Orihuela-Espina, Felipe, Atallah, Louis, Athanasiou, Thanos, Leong, Julian J., Darzi, Ara W. and Yang, Guang-Zhong (2008) Functional prefrontal reorganization accompanies learning-associated refinements in surgery: a manifold embedding approach. Computer Aided Surgery, 13(6):325-339.(BibTeX)
  49. Styles, Iain B., Calcagni, Antonio, Claridge, Ela, Orihuela-Espina, Felipe and Gibson, Jonathan M. (2006) Quantitative analysis of multispectral fundus images. Medical Image Analysis, 10(4):578-597.(BibTeX)

Books

Chapters in books

  1. Herrera-Vega, Javier and Orihuela-Espina, Felipe (2020) Ch 6. La neuroimagen funcional: introducci\'on a la formaci\'on, reconstrucci\'on e interpretaci\'on. In Aportes hacia la comprensión del comportamiento humano. (Ver\'onica Reyes Meza and J.-Mart\'in Castro-Manzano and Luis Villase\~nor Pineda, Eds.), Editorial Aula de Humanidades.(BibTeX)
  2. Orihuela-Espina, Felipe and Herrera-Vega, Javier (2018) Chapter 7 in El reconocimiento de patrones y su aplicaci\'on a las se\~nales digitales. In An\'alisis de se\~nales y reconocimiento de patrones en medicina y biolog\'ia. (G\'omez Gil, Mar\'ia del Pilar, Eds.), Academia Mexicana de Computaci\'on, A.C. (AMEXCOMP) In press.(BibTeX)
  3. G\'omez Gil, Mar\'ia del Pilar and Orihuela-Espina, Felipe (2018) Chapter 1 in El reconocimiento de patrones y su aplicaci\'on a las se\~nales digitales. In M\'aquinas capaces de percibir y entender. (G\'omez Gil, Mar\'ia del Pilar, Eds.), Academia Mexicana de Computaci\'on, A.C. (AMEXCOMP) In press.(BibTeX)
  4. Trevi\~no-Palacios, Carlos G., S\'anchez-P\'erez, Karla J., Herrera-Vega, Javier, Orihuela-Espina, Felipe, Sucar, Luis Enrique, Zapata-Nava, Oscar Javier, De-Miguel, Francisco F., Hern\'andez-Mendoza, Guillermo, Ballesteros-Zebadua, Paola, Franco-P\'erez, Javier and Celis-L\'opez, Miguel \'Angel (2017) Neurophotonics and Brain Mapping. In Functional Near-Infrared Spectroscopy: In Search of the Fast Optical Signal. (Chen, Yu and Kateb, Babak, Eds.), CRC Press, pages 77-100.(BibTeX)
  5. G\'omez-Gil, Pilar, Guzm\'an-Arenas, Adolfo, Orihuela-Espina, Felipe, Bribiesca, Ernesto and Rasc\'on, Caleb (2017) An\'alisis de Se\~nales y Reconocimiento de Patrones. In La Computaci\'on en M\'exico por especialidades acad\'emicas. (Pineda Cort\'es, Luis Alberto, Eds.), Academia Mexicana de Computaci\'on (AMEXCOMP) Pages 233-266.(BibTeX)
  6. Lucas, Peter J. F. and Orihuela-Espina, Felipe (2016) Foundations of Biomedical Knowledge Representation (Chapter 3). In Representing Knowledge for Clinical Diagnostic Reasoning. (Lucas, Peter and Hommerson, Arjen, Eds.), Springer-Verlag, pages 35-46.(BibTeX)
  7. Orihuela-Espina, F. and Sucar, L. E. (2016) Virtual Reality Enhanced Robotic Systems for Disability Rehabilitation (Chapter 8). In Adaptation and Customization in Virtual Rehabilitation. (Hu, Fei; Lu, Jiang and Zhang, Ting, Eds.), IGI Global, pages 141-163.(BibTeX)
  8. Sucar, Luis E., \'Avila-Sansores, Shender Mar\'ia and Orihuela-Espina, Felipe (2016) Foundations of Biomedical Knowledge Representation (Chapter 17). In User Modelling for Patient Tailored Virtual Rehabilitation. (Lucas, Peter and Hommerson, Arjen, Eds.), Springer-Verlag, pages 281-302.(BibTeX)
  9. Davis, Jesse, Sucar, Luis E. and Orihuela-Espina, Felipe (2016) Foundations of Biomedical Knowledge Representation (Chapter 15). In Treatment of Disease: The role of Knowledge Representation for Treatment Selection. (Lucas, Peter and Hommerson, Arjen, Eds.), Springer-Verlag, pages 254-262.(BibTeX)

Conference papers

  1. Michelle Rojas-Cisneros, Felipe Orihuela-Espina and Samuel Montero-Hernández (2021) Analysis in the Broader, Medium, and Narrow Autism Phenotypes Using fNIRS. In 2021 OSA Biophotonics Congress: Optics in the Life Sciences..(BibTeX)
  2. Jorge Hern\'andez-Franco, Felipe Orihuela-Espina, Lorena Palafox, Chanel Palencia, Cecilia Camberos-Angulo, Mar\'ia de los Remedios Quijada-Cruz, Oscar Ren\'e Marrufo-Mel\'endez, Bibiana Cuervo-Soto and Luis Enrique Sucar (2021) A Remote Central Effects Of Botulinum Toxin Type A As Adjuvant To Intense Occupational Therapy In The Early Stage Of Stroke: A Type II fMRI Randomised Controlled Trial. In TOXINS 2021 Virtual Conference: Basic Science and Clinical Aspects of Botulinum and Other Neurotoxins..(BibTeX)
  3. Rivas, Jes\'us Joel, Felipe Orihuela-Espina, Luis Enrique Sucar and Nadia Bianchi-Berthouze (2021) Dealing with a Missing Sensor in a Multilabel and Multimodal Automatic Affective States Recognition System. In 9th International Conference on Affective Computing \& Intelligent Interaction (ACII 2021)..(BibTeX)
  4. Arrieta, Freddy del Angel, Michelle Rojas Cisneros, Jes\'us Joel Rivas, Luis R. Castrej\'on, Luis Enrique Sucar, Javier Andreu-P\'erez and Felipe Orihuela-Espina (2021) Characterization of a Raspberry Pi as the Core for a Low-cost Multimodal EEG-fNIRS Platform. In 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2021).. IEEE.(BibTeX)
  5. John Sunwoo, Vidhya V. Nair, Tina Steele, Natascha Lawrence, Alexander I. Zavriyev, Adriano Peruch, Zachary Starkweather, Kuan-Cheng Wu, Felipe Orihuela-Espina, Terrie Inder, Maria Angela Franceschini and Mohamed El-Dib (2020) Assessment of Cerebral Autoregulation in Extremely Low Gestational Age Newborns using Diffuse Correlation Spectroscopy and Signal Cross-Correlation. In Pediatric Academic Societies (PAS) 2020 Meeting. Philadelphia, PA, USA, may.(BibTeX)
  6. John Sunwoo, Vidhya Nair, Tina Steele, Natascha Lawrencem, Alexander Zavriyev, Adriano Peruch, Zachary Starkweather, Kuan-Cheng Wu, Felipe Orihuela-Espina, Terrie Inder, Maria Angela Franceschini and Mohamed El-Dib (2020) Assessment of Cerebral Autoregulation in Extremely Low Gestational Age Newborns using Diffuse Correlation Spectroscopy. In 2020 OSA Biophotonics Congress: Biomedical Optics (BioMed 2020). Fort Lauderdale, Florida, USA, apr.(BibTeX)
  7. Jessica Zaqueros-Mart\'inez, Gustavo Rodr\'iguez-G\'omez, Esteban Tlelo-Cuautle and Felipe Orihuela-Espina (2020) Trigonometric Polinomyals Methods to Simulate Oscillating Chaotic Systems. In 18th International Conference of Numerical Analysis and Applied Mathematics (ICNAAM 2020)..(BibTeX)
  8. Rivas, Jes\'us Joel, Felipe Orihuela-Espina, Luis Enrique Sucar, Nadia Bianchi-Berthouze and Amanda Williams (2019) Automatic Recognition of Multiple Affective States in Virtual Rehabilitation by Exploiting the Dependency Relationships Among the States. In 8th International Conference on Affective Computing \& Intelligent Interaction (ACII 2019)..(BibTeX)
  9. Silvia I. Franco-Pastrana; Felipe Orihuela-Espina; Patrick Heyer-Wollenberg; Javier Herrera-Vega; Luis Enrique Sucar; Luis Castrej\'on; Mayela Saucedo; Lorena Palafox; Jorge Hern\'andez-Franco (2019) Out-ward monitoring of neurorehabilitation insubacute stroke. In 13th EAI International Conference on Pervasive Computing Technologies for Healthcare (Pervasive Health 2019)., 4 pp.(BibTeX)
  10. Rivas, Jes\'us Joel; Felipe Orihuela-Espina; Luis Enrique Sucar (2019) Recognition of Affective States in Virtual Rehabilitation using Late Fusion with Semi-Naďve Bayesian Classifier. In Workshop of Affective Computing in Pervasive Health in 13th EAI International Conference on Pervasive Computing Technologies for Healthcare (Pervasive Health 2019)..(BibTeX)
  11. Felipe Orihuela-Espina, Shender M. \'Avila-Sansores, Gustavo Rod\'iguez and Ilias Tachtsidis (2019) Study of distance functions and space geometry for topological analysis of connectivity in fNIRS. In fNIRS-UK 2019..(BibTeX)
  12. Ver\'onica Rodr\'iguez-L\'opez, Luis Enrique Sucar and Felipe Orihuela-Espina (2019) Toward Knowledge Transfer for Learning Markov Equivalence Classes. In 1st Causal Reasoning Workshop (CReW 2019) at 18th Mexican International Conference on Artificial Intelligence (MICAI). Available at Research in Computing Science (2020) 149(3): 113–121..(BibTeX)
  13. Kuan-Cheng Wu, Parisa Farzam, Faheem Sheri, Parya Y. Farzam, Sarah L. Michaud, Andrew D. Monk, Mohammad Ali Aziz-Sultan, Nirav Patel, Felipe Orihuela-Espina, Henrikas Vaitkevicius and Maria Angela Franceschini (2019) Monitoring cerebral blood ow and critical closing pressure in stroke patients. In Joint 29th International Symposium on Cerebral Blood Flow, Metabolism and Function and 14th International Conference on Quantication of Brain Function with PET, BRAIN \& BRAIN PET 2019. Yokohama, Japan, Jul.(BibTeX)
  14. Montero-Hern\'andez, Samuel, Orihuela-Espina, Felipe and Sucar, Luis Enrique (2018) Intervals of Causal Effects for Learning Causal Graphical Models. In 2018 International Conference on Probabilistic Graphical Models (PGM) in Proceedings of Machine Learning Research., pages 296-307.(BibTeX)
  15. Herrera-Vega, Javier, De Roever, Isabel, Tachtsidis, Ilias, Trevi\~no-Palacios, Carlos G. and Orihuela-Espina, Felipe (2018) Reconstructing scalp and brain haemoglobin in optical imaging. In 5th Functional Near Infrared Spectroscopy (fNIRS). Tokio, Japan, oct. (Durduran, Turgut and Taga, Gentaro, Eds.) ??.(BibTeX)
  16. Torres-Garc\'ia, Alejandro A., Mart\'inez-Santiago, Fernando, Cruz-Mart\'inez, Claudia, Villase\~nor-Pineda, Luis and Orihuela-Espina, Felipe (2018) OntoNIRS; specification and conceptualization of an ontology for fNIRS neuroimaging experiment design and analysis. In Neuroinformatics 2018. Montreal, Canadá, aug.(BibTeX)
  17. Rivas, Jes\'us Joel, Orihuela-Espina, Felipe and Sucar, Luis Enrique (2018) Circular Chain Classifiers. In 9th International Conference On Probabilistic Graphical Models., 12 pp..(BibTeX)
  18. Orihuela-Espina, Felipe, Torres-Garc\'ia, Alejandro Antonio, Cruz-Mart\'inez, Claudia, Villase\~nor-Pineda, Luis and Mart\'inez-Santiago, Fernando Javier (2018) OntoNIRS: Can we automatize and optimize experiment design and analysis in NIRS neuroimaging for more rigorous interpretation? In 5th Functional Near Infrared Spectroscopy (fNIRS). Tokio, Japan, oct. (Durduran, Turgut and Taga, Gentaro, Eds.) ??.(BibTeX)
  19. C. Sharma, Mikael Sodergren, Harsimrat Singh, Felipe Orihuela-Espina and Ara Darzi (2018) Visual gaze patterns reveal surgeons' ability to identify risk of bile duct injury during laparoscopic cholecystectomy. In 13th World Congress of the International Hepato-Pancreato-Biliary Association. Abstract in HPB., S239.(BibTeX)
  20. Montero, Samuel, Sucar, Luis Enrique and Orihuela-Espina, Felipe (2018) A Pipeline for Discovering Effective Connectivity in fNIRS. In 5th Functional Near Infrared Spectroscopy (fNIRS). Tokio, Japan, oct. (Durduran, Turgut and Taga, Gentaro, Eds.) ??.(BibTeX)
  21. Samuel A. Montero-Hern\'andez, Javier Herrera-Vega, Luis Enrique Sucar and Felipe Orihuela-Espina (2017) Group-level Graphical Causal Modelling of Effective Connectivity in fNIRS. In I Mexican Symposium in NIRS Neuroimaging. Puebla, M\'exico, OCT 20-21st. (Franceschini, Maria Angela and Orihuela-Espina, Felipe, Eds.) Page 22.(BibTeX)
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  83. James, David R. C., Leff, Daniel R., Orihuela-Espina, Felipe, Kwok, Ka-Wai, Mylonas, George P., Darzi, Ara W. and Yang, Guang-Zhong (2010) Frontoparietal Activation during Learning of a Visuomotor Tracking Task: a Longitudinal fNIRS Study. In 16th Annual Meeting of the Organization for Human Brain Mapping (OHBM). Barcelona, Spain, 6-10th Jun, page 145.(BibTeX)
  84. James, David R. C., Orihuela-Espina, Felipe, Leff, Daniel R., Mylonas, George P., Kwok, Ka-Wai, Darzi, Ara W. and Yang, Guang-Zhong (2010) Cognitive Burden Estimation for Visuomotor Learning with fNIRS. In Medical Image Computing and Computer Assisted Interventions (MICCAI). Beijing, China, SEP. Springer-Verlag, pages 319-326.(BibTeX)
  85. Paggetti, Giulia, Menegaz, Gloria, Leff, Daniel R., Orihuela-Espina, Felipe, Mylonas, George P., Lerotic, Mirna, Darzi, Ara W. and Yang, Guang-Zhong (2010) An Assessment of Parietal Function during Depth Perception and Coordination in Surgical Robotics. In 16th Annual Meeting of the Organization for Human Brain Mapping (OHBM). Barcelona, Spain, 6-10th Jun, page 63.(BibTeX)
  86. Orihuela-Espina, Felipe, Leff, Daniel R., Paggetti, Giulia, James, David R. C., Darzi, Ara W. and Yang, Guang-Zhong (2010) Influence of temporal window selection on activation detection variation for fNIRS. In 16th Annual Meeting of the Organization for Human Brain Mapping (OHBM). Barcelona, Spain, 6-10th Jun, page 31.(BibTeX)
  87. Paggetti, Giulia, Menegaz, Gloria, Leff, Daniel R., Orihuela-Espina, Felipe, Darzi, Ara W. and Yang, Guang-Zhong (2010) Exploring the link between depth perception, hand-eye coordination and parietal lobe activation during robotic-assisted interventions. In 33rd European Conference on Visual Perception (ECVP). Lausanne, Switzerland, 22nd - 26th Aug, pages 162-163.(BibTeX)
  88. James, David R. C., Orihuela-Espina, Felipe, Leff, Daniel R., Mylonas, George P., Kwok, Ka-Wai, Darzi, Ara W. and Yang, Guang-Zhong (2010) Neuroergonomic assessment of the robotic enhancement of surgery. In 2010 The Society of American Gastrointestinal and Endoscopic Surgeons (SAGES) World Congress. Landover (Washington), MD, USA, 14-17th APR.(BibTeX)
  89. Orihuela-Espina, Felipe, Leff, Daniel R., James, David R. C., Kwok, Ka-Wai, Sun, Loi-Wah, Darzi, Ara W. and Yang, Guang-Zhong (2010) Remote gaze assistance manipulates visual attention, enhances cortical activity and improves technical skills of a local operator: Implications for collaborative tele-robotic surgical procedures.. In 1st Functional Near Infrared Spectroscopy. Boston, MA, USA, 15-17th Oct. (Boas, David, Eds.). Harvard University.(BibTeX)
  90. Leff, Daniel R., Orihuela-Espina, Felipe, Athanasiou, Thanos, Elwell, Claire, Yang, Guang-Zhong and Darzi, Ara W. (2010) Decoupling Neurocognitive and Technical Performance in Sleep Deprived Surgical Residents through Longitudinal Analyses of Cortical Brain Function: Advancing our Understanding of Compensation to Acute Fatigue.. In American College of Surgeons 96th Annual Clinical Congress. Washington DC, USA, 3-7th Oct, S118.(BibTeX)
  91. Karimyan, Vahe, Orihuela-Espina, Felipe, James, David R. C., Clark, James, Sodergren, Mikael H., Darzi, Ara W. and Yang, Guang-Zhong (2010) Spatial awareness anhancement in Natural Orifice Translumenal Endoscopic Surgery (NOTES) by means of an additional visualization. In 3rd Hamlyn Symposium on Medical Robotics. London, UK, 25th May. (Yang, Guang-Zhong and Darzi, Ara W., Eds.) Pages 39-40.(BibTeX)
  92. Sodergren, Mikael H., Orihuela-Espina, Felipe, Clark, James, Yang, Guang-Zhong and Darzi, Ara W. (2009) A model to characterise re-orientation strategies in Natural Orifice Translumenal Endoscopic Surgery (NOTES). In 4th International Conference on Spatial Cognition. Rome, Italy, 14-18 Sep.(BibTeX)
  93. Orihuela-Espina, Felipe, Leff, Daniel R., James, David R. C., Darzi, Ara W. and Yang, Guang-Zhong (2009) ICNA: A software tool for manifold embedded based analysis of functional near infrared spectroscopy data. In 15th Annual Meeting of the Organization for Human Brain Mapping (OHBM). San Francisco, CA, USA, 18-23th Jun, S59.(BibTeX)
  94. Caproni, Marco, Orihuela-Espina, Felipe, James, David R. C., Menciassi, Arianna, Dario, Paolo, Darzi, Ara W. and Yang, Guang-Zhong (2009) An Analysis Framework for Near Infrared Spectroscopy Based Brain-Computer Interface and Prospective Application to Robotic Surgery. In IEEE/RSJ International Conference on Intelligent RObots and Systems (IROS). St. Louis, MO, USA, 10-15 OCT. IEEE, pages 2143 - 2148.(BibTeX)
  95. James, David R. C., Orihuela-Espina, Felipe, Clark, James, Yang, Guang-Zhong and Darzi, Ara W. (2009) Performance, stress and cortical activity during navigation in a Natural Orifice Translumenal Endoscopic Surgery (NOTES) environment. In Annual Scientific Meeting of the Association of Surgeons of Great Britain and Ireland (ASGBI 2009). Glasgow, UK, 13-15th May, pages 82-182.(BibTeX)
  96. Leff, Daniel R., Orihuela-Espina, Felipe, Karimyan, Vahe, Yang, Guang-Zhong and Darzi, Ara W. (2009) Comparing prefrontal responses evoked by a visuomotor task and a cognitive problem solving task: A longitudinal fNIRS evaluation in surgical trainees. In 15th Annual Meeting of the Organization for Human Brain Mapping (OHBM). San Francisco, CA, USA, 18-23th Jun, S190.(BibTeX)
  97. James, David R. C., Orihuela-Espina, Felipe, Sodergren, Mikael H., Darzi, Ara W. and Yang, Guang-Zhong (2009) Prefrontal cortical blood flow in a complex navigational task: a functional Near Infrared Spectroscopy (fNIRS) study. In 15th Annual Meeting of the Organization for Human Brain Mapping (OHBM). San Francisco, CA, USA, 18-23th Jun, S172.(BibTeX)
  98. Leff, Daniel R., Athanasiou, Thanos, Leong, Julian J., Orihuela-Espina, Felipe, Yang, Guang-Zhong and Darzi, Ara W. (2008) Prefrontal reorganisation accompanies learning associated refinements in surgery (POLARIS). In Annual Scientific Meeting of the Association of Surgeons of Great Britain and Ireland (ASGBI 2008). Bournemouth, UK, 14-16th May, pages 87-192.(BibTeX)
  99. Leff, Daniel R., Leong, Julian J., Orihuela-Espina, Felipe, Atallah, Louis, Elwell, Claire, Delpy, David, Yang, Guang-Zhong and Darzi, Ara W. (2008) Variations in prefrontal activation support technical performance improvements in surgical novices. In Annual Meeting of the Society of Academic and Research Surgery (SARS). Birmingham, UK, 9-11th Jan, page 936.(BibTeX)
  100. Leff, Daniel R., Orihuela-Espina, Felipe, Leong, Julian J., Darzi, Ara W. and Yang, Guang-Zhong (2008) Modelling Dynamic Fronto-Parietal Behaviour during Minimally Invasive Surgery - a Markovian Trip Distribution Approach. In Medical Image Computing and Computer Assisted Interventions (MICCAI). New York, USA, SEP. Springer-Verlag, pages 595-602.(BibTeX)
  101. Leff, Daniel R., Orihuela-Espina, Felipe, Atallah, Louis, Darzi, Ara W. and Yang, Guang-Zhong (2007) Functional near infrared spectroscopy in novice and expert surgeons - a manifold embedding approach. In Medical Image Computing and Computer Assisted Interventions (MICCAI). Brisbane, Australia, SEP, pages 270-277.(BibTeX)
  102. Claridge, Ela, Hidovic-Rowe, Dzena, Orihuela-Espina, Felipe and Styles, Iain B. (2006) Quantifying composition of human tissues from multispectral images using a model of image formation. In Workshop on Biophotonics Imaging for Diagnostics and Treatment in Medical Image Computing and Computer Assisted Interventions (MICCAI). Copenhagen, Denmark, SEP. (Ersboll B. K. and Jorgensen, T. M., Eds.) Pages 7-14.(BibTeX)
  103. Styles, Iain B., Claridge, Ela, Orihuela-Espina, Felipe, Calcagni, Antonio and Gibson, Jonathan M. (2005) Quantitative interpretation of multi-spectral fundus images. In Proceedings of SPIE Medical Imaging: Physiology, Function and Structure from Medical Images. (Amir A. Amini and Armando Manduca, Eds.) Pages 267-278, . SPIE.(BibTeX)
  104. Calcagni, Antonio, Styles, Iain B., Claridge, Ela, Orihuela-Espina, Felipe and Gibson, Jonathan M. (2005) Multispectral Fundus Analysis. In European Association for Vision and Eye Research Meeting (EVER05). Oct, page 72.(BibTeX)
  105. Styles, Iain B., Claridge, Ela and Orihuela-Espina, Felipe (2004) Quantitative interpretation of uncalibrated fundus images. In Association for Research in Vision and Opthalmology (ARVO) Annual Meeting. Fort Lauderdale, Florida, USA, APR, E-Abstract 2792.(BibTeX)
  106. Orihuela-Espina, Felipe, Claridge, Ela and Styles, Iain B. (2004) Validation of a physics-based model of the reflectance of the ocular fundus. In Association for Research in Vision and Opthalmology (ARVO) Annual Meeting. Fort Lauderdale, Florida, USA, APR, E-Abstract 2789.(BibTeX)
  107. Orihuela-Espina, Felipe and Claridge, Ela (2003) A new optical imaging method for the ocular fundus. In AAPM Annual Meeting Medical Imaging Research Symposium. San Diego, CA, USA, AUG, page 1540.(BibTeX)
  108. Orihuela-Espina, Felipe, Claridge, Ela and Preece, Stephen J. (2003) Histological parametric maps of the human ocular fundus: preliminary results. In Medical Image Understanding and Analysis (MIUA). Sheffield, UK, APR, pages 133-136.(BibTeX)

Technical reports

  1. \'Avila Sansores, Shender Mar\'ia; Gustavo Rodr\'iguez G\'omez and Orihuela-Espina, Felipe (2016) Modelling effective brain connectivity using manifolds in optical functional neuroimaging. Technical Report CCC-16-006, National Institute of Astrophysics, Optics and Electronics, INAOE.(BibTeX)
  2. Herrera-Vega, Javier and Orihuela-Espina, Felipe (2015) Image Reconstruction in Functional Optical Neuroimaging. The modelling and separation of the scalp blood flow: A research proposal. Technical Report CCC-15-002, Division of Computational Sciences. National Institute of Astrophysics, Optics and Electronics, INAOE (Mexico).(BibTeX)
  3. Orihuela-Espina, Felipe and Sucar, Luis Enrique (2011) Functional reorganization strategies associated to motor rehabilitation Gesture Therapy. Technical Report CCC-11-001, National Institute of Astrophysics, Optics and Electronics, INAOE.(BibTeX)
  4. Styles, Iain B., Calcagni, Antonio, Claridge, Ela and Orihuela-Espina, Felipe (2005) Quantitative analysis of multispectral fundus images. Technical Report CSR-05-08, School of Computer Science, University of Birmingham.(BibTeX)
  5. Claridge, Ela and Orihuela-Espina, Felipe (2002) Validating a Monte Carlo model of the human eye fundus using polynomial regression. Technical Report CSR-02-10, School of Computer Science, University of Birmingham.(BibTeX)

Thesis

PhD thesis

  1. Orihuela-Espina, Felipe (2005) Modelling and verification of the diffuse re ectance of the ocular fundus. PhD thesis, School of Computer Science, The University of Birmingham (UK).(BibTeX)

MSc thesis